De nada.
Wish I could examine and test-fire the gun, as well as watch you shoot it. You right-handed? If you're left-handed, you can ignore some of the following ...
The reason I ask is that I've come across a few right-handed shooters who were experiencing either premature lock-back (with rounds remaining in the mag), or failure of the slide to lock-back on an empty mag.
The last couple of times it was puzzling to the other instructors working with the shooter, so they called me over. Once a brief examination of the gun revealed no obvious problems, I had the shooters fire rounds while I watched, making them focus on making rapid, accurate shots (to put them under a bit of minor stress).
While their support hand thumbs weren't near the slide stop levers before they fired each round, or after each shot was done, the rising/falling of the cycling gun caused them to shift their support hand grips just enough to let them bump, or press, against the slide stop lever during recoil. They didn't believe me, so I ahd them shoot the guns left-handed (putting their thumbs on the opposite side from the slide stop levers).
When the "problem" went away while they were shooting left-handed, they acknowledged a possible need to revise their grip technique (thumb placement) a little bit.
I've also had this problem occur with an occasional Sig shooter, especially when going from a full-size to a compact model with a right-handed shooter.
So, if you're right-handed, and you're able and comfortable shooting left-handed, you might try it and see if the problem still occurs. If so, we're back to either a gun or mag problem. If not?
Also, if the "problem" consistently follows a couple fo specific mags, I'd simply try to obtain some other mags (either factory or Mec-Gar) and see if the problem is resolved. Sometimes a mag body wear, damage or spec problem may not be visible to the naked (and even trained) eye, but can still cause problems, nonetheless.
Lastly, don't discount the potential for an occasional ammunition influence to rear its unexpected head. I usually default to test-firing with one or another of the major American brands of quality 9mmP ammo. Duty/defensive type, if possible, but budget brands if necessary. It's not all that surprising if a company's "budget" line of ammo might not use all the same quality components, is it?
Even variations in power (slide velocity) c an have an adverse effect on side travel and cycling speed, and might cause some erratic slide stop lever/slide notch engagement issues. Just depends. Couple either lower or over-powered ammo with an unfortunate lack of a solid grip (firm - not death - grip, and a locked wrist), and sometimes weird issues can pop up and make someone scratch their head.
One last thought. How old/worn is the recoil spring? Too fresh ( at peak of tension) and you can get some resistance to slide travel and run, especially if couple with a hesitant grip or lower powered ammo. Too weak/worn, and the slide might be traveling just too fast "enough" to bounce away from the follower being able to lift and capture the slide.
Obviously, this sort of thing can be difficult, if not impossible, to diagnose and resolve in an online manner. It really requires being present to examine the gun and observe the shooter (using the particular ammo, mags, etc).