I'm not sure when S&W used the solid extractor pins, but my oldest M&P (6/12) still has the original pin and it's a spring pin (not a roll pin). I popped it out from the bottom without a problem. I think the reason that they say to do it from the top is that there's a bit of a hole that guides the punch rather than try to line it up with a flush pin. (and the slide is steadier that way too). The size of the punch I used is .072" not a 1/16" (which is .062") This may contribute to the difficulty getting the pin out originally. (PS I don't have any armorers manuals, I just do it the old fashioned way)
The change over from the solid pin to the current
coiled spring pin (which I lazily called a "roll" pin, as a generic term for something other than a solid pin

) started occurring in the last few years. It was the original pin type in the .45 from the get-go, though.
Since the new coil pins have some "give" to them, we were told it's probably not going to hurt the slide (which is through hardened) if one of the coiled spring pins gets driven out the top. (Sloppy for an armorer to do it backwards, though.) However, once driven down into the hole from the top, meaning through the smaller opening of the top, it might not hold as well as if driven up into & against the tighter end of the pin hole (meaning from the bottom).
FWIW, I was told in another conversation with someone from the factory that the company had finally gotten around to identifying the proper size coil pins that could be used as extractor pins in 3rd gen guns, but that the website's parts list would not reflect that recent change. Instead, I'd have to call back and try to find a LE parts/service contact who could call around and/or look up the right part number (since the 3rd gen guns are dwindling in agency use).
So far, I've still only gotten the standard solid pins when ordering some extra 3rd gen extractor pins, hoping to see the new optional coil pins.
Yep, using the wrong size roll pin punch to try and drive out the pin could add some annoyance factor.
The current list of armorer tools for the M&P pistols:
*1/16 Hex/Allen wrench
*Flat blade screw driver (small)
*Armorer's block
*1/16 drive punch
*1/16 starter punch (for older solid style extractor pins)

*1/16 roll pin punch
*1/8 roll pin punch
*Sigma tool (optional) - a nice plastic handled pin punch
*1/8 drive punch
*Hammer (preferably with brass/nylon head)
*1/4 brass rod
*S&W M&P sight tool
Now, the old Sigma (later the 'plastic pistol', or SW99) assembly pin is also pretty helpful for installing the headed trigger pin (what we used to call a 'slave' pin). It's still listed in the older plastic/M&P pistol armorer tool kit on their website.
http://www.smith-wesson.com/webapp/...57974_757972_757787_ProductDisplayErrorView_N Click for the toolkit info.